Solanum tuberosumAssembly Name:DM_v4.03
Gene File:Stuberosum_448_v4.03.protein.fa.gz
| Position on the Genome | Gene Name | CDS | PGSC0003DMT400003611 |
| PEP | PGSC0003DMP400002573 |
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| Position on the Genome | Chromosome | ST4.03ch02 | |
| Start Position | 46114301 | ||
| End Position | 46122712 | ||
| Strand | + | ||
| Annotation (Hayai Annotation ZEN) |
KusakiDB | KusakiDB Accession | KUNI01018431 |
|---|---|---|---|
| KusakiDB version | 2 | ||
| Evidence is present | Yes | ||
| Databases intersection (the sequence exists in multiple databases) | orthodb-refseq-uniprot |
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| OrthoDB | Database version | 10.1 | |
| Description | PTBPH1/PTBPH2, RNA recognition motif 1 |
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| Gene ID | |||
| Ortholog group unique ID | |||
| Functional annotation | Source DB | trembl |
|
| Protein name | Polypyrimidine tract-binding protein |
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| Accession | |||
| CrossRef Refseq from UniProt | |||
| EC | NA |
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| KEGG entry | |||
| KO ID | NA |
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| Pfam ID | PF00076,PF11835 |
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| Pfam Description | Details | ||
| InterPro ID | IPR000504,IPR034793,IPR021790,IPR035979,IPR012677,IPR034794,IPR034792 |
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| InterPro Description | Details | ||
| GO ID | GO:0005634,GO:0003729,GO:0043484,GO:0000932,GO:0006417,GO:0009845,GO:0000381 |
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| GO Description | Details | ||
| GOslim ID | GO:0000375,GO:0050789,GO:0005634,GO:0032502,GO:0005737,GO:0043232,GO:0006396,GO:0032501,GO:0003676 |
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| GO slim Description | Details | ||
| Transcription Factor (TF) family | NA |
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| TF family Description | NA |
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| Best hit taxonomy | Species | Solanum tuberosum | |
| Family | Solanaceae | ||
| Phylum | Streptophyta | ||
| Superkingdom | Eukaryota | ||
| Comments | sot:102580655 | ||
