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Solanum lycopersicum

Assembly Name:SL3.00

Gene File:ITAG3.2_proteins.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
Solyc03g119910.3.1
PEP
Solyc03g119910.3.1
Position on the Genome Chromosome SL3.0ch03
Start Position 69942144
End Position 69943612
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00642676
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Oxoglutarate/iron-dependent dioxygenase
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
3b-hydroxylase
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
KO ID
Pfam ID
PF14226,PF03171
Pfam Description Details
InterPro ID
IPR026992,IPR027443,IPR005123
InterPro Description Details
GO ID
GO:0031418,GO:0046872,GO:0016491
GO Description Details
GOslim ID
GO:0030246,GO:0019842,GO:0031406,GO:0043167,GO:0016491
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Solanum lycopersicum
Family Solanaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , cv. Heinz 1706 , Solanaceae , ナス科 , Solanum , ナス属 , Tomato, Cherry tomato , トマト, ミニトマト, マメトマト Tomato , トマト

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.