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アセンブル , シーケンス , Assemble , Sequence , Megacarpaea delavayi , Megacarpaea delavayi , Megacarpaea delavayi

Megacarpaea delavayi

Genome Assembly ID:t264428.G001

Sequence Name:GWHANWI00000000.genome

Details of the Assembled Genome Sequences

Assembly Name GWHANWI00000000.genome Biological Sample wild accession
Number of Sequences 286,039 Number of Chromosomes 2n = 18
Total Length (bp) 819,102,343 N50 Length (bp) 74,620
Number of Genes 43,650 Number of Genes Source File GWHANWI00000000.Protein.faa.gz
Number of Genes Annotated by Hayai-annotation 43,650 Hayai-Annotation Version zen_v2.0
Sequencing Method Illumina Read Depth 150x
Assembly Method Platanus v1.2.4 Estimated Genome Size (Mb) 899
Sequencing Method Comments They constructed Illumina paired-end libraries with small (230, 500, and 800 bp) and large (2, 5, 10, and 20 kb) insert sizes and read lengths of 150 bp. Comments NA
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author Quanjun Hu(Sichuan University) Data Source National Genomics Data Center
DOI/PMID 10.3389/fgene.2020.00812 Data Source URL https://bigd.big.ac.cn
BUSCO Version 5.8.2 BUSCO Dataset embryophyta_odb10
BUSCO Genome C:96.5%[S:87.0%,D:9.5%],F:2.3%,M:1.2%,n:1614 BUSCO Gene (pep/cds) C:92.1%[S:64.2%,D:27.9%],F:3.7%,M:4.2%,n:1614

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