Sequence Name:Primula_veris_maternal_haplotype
Assembly Name | Primula_veris_maternal_haplotype | Biological Sample | ssp. veris, T78 (From the F1 population obtained by crossing female T2DB3 and male P20031402) |
Number of Sequences | 648 | Number of Chromosomes | 2n = 2x = 22 |
Total Length (bp) | 421,379,260 | N50 Length (bp) | 34,034,358 |
Number of Genes | 34,580 | Number of Genes Source File | pve_haplotypeT.longCDS.fasta.gz |
Number of Genes Annotated by Hayai-annotation | 0 | Hayai-Annotation Version | zen_v2.0 |
Sequencing Method | Oxford Nanopore, Illumina | Read Depth | 114x (ONT), 63x (Illumina) |
Assembly Method | Canu v.1.8 | Estimated Genome Size (Mb) | 452 |
Sequencing Method Comments | NA | Comments | The maternal and paternal nanopore data sets were assembled separately, resulting in two haploid assemblies. |
Copyright information for the article | In preparation | Copyright information for the data / database | In preparation |
Corresponding author | Elena Conti (University of Zurich) | Data Source | Figshare |
DOI/PMID | 10.1093/molbev/msac035 | Data Source URL | https://figshare.com |
BUSCO Version | BUSCO Dataset | ||
BUSCO Genome | BUSCO Gene (pep/cds) |