# Assembly Statistics Report # Assembly name: ASM2978261v1 # Organism name: Hordeum vulgare (barley) # Isolate: wild type S # Taxid: 4513 # BioSample: SAMN33865288 # BioProject: PRJNA947680 # Submitter: Yangtze University # Date: 2023-04-19 # Assembly type: haploid # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JAROYY01 # Assembly method: SOAPdenovo v. 1.0 # Expected final version: yes # Genome coverage: 56x # Sequencing technology: Oxford Nanopore PromethION # GenBank assembly accession: GCA_029782615.1 # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_029783865.1 Primary Assembly # # Statistic Types # Statistic Description # component-count Number of unique components # contig-L50 Number of contigs that are longer than, or equal to, the N50 length # contig-N50 Contig length at which 50% of total bases in assembly are in contigs of that length or greater # contig-count Number of contigs # gc-perc gc-count/atgc-count as percentage # molecule-count Number of chromosomes and plasmids in full assembly # region-count Number of genomic regions defined in full assembly # scaffold-L50 Number of scaffolds that are longer than, or equal to, the N50 length # scaffold-N50 Scaffold length at which 50% of total bases in assembly are in scaffolds of that length or greater # scaffold-N75 Scaffold length at which 75% of total bases in assembly are in contigs of that length or greater # scaffold-N90 scaffold length at which 90% of total bases in assembly are in contigs of that length or greater # scaffold-count Number of scaffolds # spanned-gaps Number of spanned gaps. Spanned gaps are gaps within a scaffold # top-level-count Number of chromosomes or plasmids, unplaced/unlocalized scaffolds, alt-loci scaffolds, and patch scaffolds # total-gap-length Total length of gaps # total-length Total sequence length including bases and gaps # ungapped-length Total length excluding gaps # unspanned-gaps Number of unspanned gaps. Unspanned gaps are gaps between scaffolds # # Sequence-type Description # all statistic covers all the sequences in the unit-assembly and molecule(s) specified. # molecule statistic covers the specified molecule. molecule-name and molecule-type/loc will be given. # unlocalized statistic covers the sequences assigned to a molecule but with no position. molecule-name and molecule-type/loc will be given. # unplaced statistic covers the sequences not assigned to any molecule in the assembly. # # unit-name molecule-name molecule-type/loc sequence-type statistic value all all all all total-length 5110990204 all all all all spanned-gaps 3687 all all all all unspanned-gaps 0 all all all all region-count 0 all all all all scaffold-count 3224 all all all all scaffold-N50 668540849 all all all all scaffold-L50 4 all all all all scaffold-N75 613002666 all all all all scaffold-N90 712131 all all all all contig-count 6911 all all all all contig-N50 1669008 all all all all contig-L50 847 all all all all total-gap-length 85863861 all all all all molecule-count 7 all all all all top-level-count 3224 all all all all component-count 3224 all all all all gc-perc 44 Primary Assembly all all all total-length 5110990204 Primary Assembly all all all ungapped-length 5025126343 Primary Assembly all all all scaffold-count 3224 Primary Assembly all all all scaffold-N50 668540849 Primary Assembly all all all spanned-gaps 3687 Primary Assembly all all all unspanned-gaps 0 Primary Assembly all all all gc-perc 44 Primary Assembly all all assembled-molecule total-length 4524099973 Primary Assembly all all assembled-molecule ungapped-length 4441149283 Primary Assembly all all assembled-molecule scaffold-count 7 Primary Assembly all all assembled-molecule scaffold-N50 668540849 Primary Assembly all all assembled-molecule spanned-gaps 3644 Primary Assembly all all assembled-molecule unspanned-gaps 0 Primary Assembly all all assembled-molecule gc-perc 44 Primary Assembly all all unlocalized-scaffold total-length 0 Primary Assembly all all unlocalized-scaffold ungapped-length 0 Primary Assembly all all unlocalized-scaffold scaffold-count 0 Primary Assembly all all unlocalized-scaffold scaffold-N50 0 Primary Assembly all all unlocalized-scaffold spanned-gaps 0 Primary Assembly all all unlocalized-scaffold unspanned-gaps 0 Primary Assembly na na unplaced-scaffold total-length 586890231 Primary Assembly na na unplaced-scaffold ungapped-length 583977060 Primary Assembly na na unplaced-scaffold scaffold-count 3217 Primary Assembly na na unplaced-scaffold scaffold-N50 353134 Primary Assembly na na unplaced-scaffold spanned-gaps 43 Primary Assembly na na unplaced-scaffold unspanned-gaps 0 Primary Assembly na na unplaced-scaffold gc-perc 43.5 Primary Assembly 1H Chromosome all total-length 554165481 Primary Assembly 1H Chromosome all ungapped-length 543721148 Primary Assembly 1H Chromosome all scaffold-count 1 Primary Assembly 1H Chromosome all scaffold-N50 554165481 Primary Assembly 1H Chromosome all spanned-gaps 462 Primary Assembly 1H Chromosome all unspanned-gaps 0 Primary Assembly 1H Chromosome all gc-perc 44 Primary Assembly 1H Chromosome assembled-molecule total-length 554165481 Primary Assembly 1H Chromosome assembled-molecule ungapped-length 543721148 Primary Assembly 1H Chromosome assembled-molecule scaffold-count 1 Primary Assembly 1H Chromosome assembled-molecule scaffold-N50 554165481 Primary Assembly 1H Chromosome assembled-molecule spanned-gaps 462 Primary Assembly 1H Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 1H Chromosome assembled-molecule gc-perc 44 Primary Assembly 1H Chromosome unlocalized-scaffold total-length 0 Primary Assembly 1H Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 1H Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 1H Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 1H Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 1H Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 2H Chromosome all total-length 701211237 Primary Assembly 2H Chromosome all ungapped-length 692289811 Primary Assembly 2H Chromosome all scaffold-count 1 Primary Assembly 2H Chromosome all scaffold-N50 701211237 Primary Assembly 2H Chromosome all spanned-gaps 570 Primary Assembly 2H Chromosome all unspanned-gaps 0 Primary Assembly 2H Chromosome all gc-perc 44 Primary Assembly 2H Chromosome assembled-molecule total-length 701211237 Primary Assembly 2H Chromosome assembled-molecule ungapped-length 692289811 Primary Assembly 2H Chromosome assembled-molecule scaffold-count 1 Primary Assembly 2H Chromosome assembled-molecule scaffold-N50 701211237 Primary Assembly 2H Chromosome assembled-molecule spanned-gaps 570 Primary Assembly 2H Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 2H Chromosome assembled-molecule gc-perc 44 Primary Assembly 2H Chromosome unlocalized-scaffold total-length 0 Primary Assembly 2H Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 2H Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 2H Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 2H Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 2H Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 3H Chromosome all total-length 675903409 Primary Assembly 3H Chromosome all ungapped-length 666238726 Primary Assembly 3H Chromosome all scaffold-count 1 Primary Assembly 3H Chromosome all scaffold-N50 675903409 Primary Assembly 3H Chromosome all spanned-gaps 546 Primary Assembly 3H Chromosome all unspanned-gaps 0 Primary Assembly 3H Chromosome all gc-perc 44 Primary Assembly 3H Chromosome assembled-molecule total-length 675903409 Primary Assembly 3H Chromosome assembled-molecule ungapped-length 666238726 Primary Assembly 3H Chromosome assembled-molecule scaffold-count 1 Primary Assembly 3H Chromosome assembled-molecule scaffold-N50 675903409 Primary Assembly 3H Chromosome assembled-molecule spanned-gaps 546 Primary Assembly 3H Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 3H Chromosome assembled-molecule gc-perc 44 Primary Assembly 3H Chromosome unlocalized-scaffold total-length 0 Primary Assembly 3H Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 3H Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 3H Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 3H Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 3H Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 4H Chromosome all total-length 668540849 Primary Assembly 4H Chromosome all ungapped-length 652735292 Primary Assembly 4H Chromosome all scaffold-count 1 Primary Assembly 4H Chromosome all scaffold-N50 668540849 Primary Assembly 4H Chromosome all spanned-gaps 559 Primary Assembly 4H Chromosome all unspanned-gaps 0 Primary Assembly 4H Chromosome all gc-perc 44.5 Primary Assembly 4H Chromosome assembled-molecule total-length 668540849 Primary Assembly 4H Chromosome assembled-molecule ungapped-length 652735292 Primary Assembly 4H Chromosome assembled-molecule scaffold-count 1 Primary Assembly 4H Chromosome assembled-molecule scaffold-N50 668540849 Primary Assembly 4H Chromosome assembled-molecule spanned-gaps 559 Primary Assembly 4H Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 4H Chromosome assembled-molecule gc-perc 44.5 Primary Assembly 4H Chromosome unlocalized-scaffold total-length 0 Primary Assembly 4H Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 4H Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 4H Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 4H Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 4H Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 5H Chromosome all total-length 632176186 Primary Assembly 5H Chromosome all ungapped-length 621726960 Primary Assembly 5H Chromosome all scaffold-count 1 Primary Assembly 5H Chromosome all scaffold-N50 632176186 Primary Assembly 5H Chromosome all spanned-gaps 478 Primary Assembly 5H Chromosome all unspanned-gaps 0 Primary Assembly 5H Chromosome all gc-perc 44 Primary Assembly 5H Chromosome assembled-molecule total-length 632176186 Primary Assembly 5H Chromosome assembled-molecule ungapped-length 621726960 Primary Assembly 5H Chromosome assembled-molecule scaffold-count 1 Primary Assembly 5H Chromosome assembled-molecule scaffold-N50 632176186 Primary Assembly 5H Chromosome assembled-molecule spanned-gaps 478 Primary Assembly 5H Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 5H Chromosome assembled-molecule gc-perc 44 Primary Assembly 5H Chromosome unlocalized-scaffold total-length 0 Primary Assembly 5H Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 5H Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 5H Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 5H Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 5H Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 6H Chromosome all total-length 613002666 Primary Assembly 6H Chromosome all ungapped-length 599606562 Primary Assembly 6H Chromosome all scaffold-count 1 Primary Assembly 6H Chromosome all scaffold-N50 613002666 Primary Assembly 6H Chromosome all spanned-gaps 500 Primary Assembly 6H Chromosome all unspanned-gaps 0 Primary Assembly 6H Chromosome all gc-perc 44 Primary Assembly 6H Chromosome assembled-molecule total-length 613002666 Primary Assembly 6H Chromosome assembled-molecule ungapped-length 599606562 Primary Assembly 6H Chromosome assembled-molecule scaffold-count 1 Primary Assembly 6H Chromosome assembled-molecule scaffold-N50 613002666 Primary Assembly 6H Chromosome assembled-molecule spanned-gaps 500 Primary Assembly 6H Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 6H Chromosome assembled-molecule gc-perc 44 Primary Assembly 6H Chromosome unlocalized-scaffold total-length 0 Primary Assembly 6H Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 6H Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 6H Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 6H Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 6H Chromosome unlocalized-scaffold unspanned-gaps 0 Primary Assembly 7H Chromosome all total-length 679100145 Primary Assembly 7H Chromosome all ungapped-length 664830784 Primary Assembly 7H Chromosome all scaffold-count 1 Primary Assembly 7H Chromosome all scaffold-N50 679100145 Primary Assembly 7H Chromosome all spanned-gaps 529 Primary Assembly 7H Chromosome all unspanned-gaps 0 Primary Assembly 7H Chromosome all gc-perc 44 Primary Assembly 7H Chromosome assembled-molecule total-length 679100145 Primary Assembly 7H Chromosome assembled-molecule ungapped-length 664830784 Primary Assembly 7H Chromosome assembled-molecule scaffold-count 1 Primary Assembly 7H Chromosome assembled-molecule scaffold-N50 679100145 Primary Assembly 7H Chromosome assembled-molecule spanned-gaps 529 Primary Assembly 7H Chromosome assembled-molecule unspanned-gaps 0 Primary Assembly 7H Chromosome assembled-molecule gc-perc 44 Primary Assembly 7H Chromosome unlocalized-scaffold total-length 0 Primary Assembly 7H Chromosome unlocalized-scaffold ungapped-length 0 Primary Assembly 7H Chromosome unlocalized-scaffold scaffold-count 0 Primary Assembly 7H Chromosome unlocalized-scaffold scaffold-N50 0 Primary Assembly 7H Chromosome unlocalized-scaffold spanned-gaps 0 Primary Assembly 7H Chromosome unlocalized-scaffold unspanned-gaps 0