Plant GARDEN
Raphanus sativus

Genome Assembly ID:t3726.G002

Sequence Name:Rs1.0

Details of the Assembled Genome Sequences

Scientific Name Raphanus sativus
Sequence Name Rs1.0
Biological Sample WK10039
Assembly Level Chromosome
Number of Sequences 10,674
Number of Chromosomes 2n=18
Total Length (bp) 426,202,302
N50 Length (bp) 38,354,807
Sequencing Method Sanger, Illumina, 454, SOLiD
Sequencing Method Comments NA
Read Depth 267x
Assembly Method Newbler v. 1.2.3
Estimated Genome Size (Mb) 538
Submitter Dr. Namshin Kim at KRIBB
DOI 10.1007/s13580-018-0079-y
Comments NA

Search Genes



Cut-Out Genome Sequences

Chromosome /
Scaffolds
Start Position
End Position
Complementary Strand

Other Sequences

Sequence Type File Name Download Comment

Gene (cds / gene)

Rs_1.0.cds.fa.gz

genome

Rs_1.0.chromosomes.fix.fasta.gz

Annotation (gff / gff3)

Rs_1.0.Gene.LFY.gff.gz

Hayai Annotation ZEN

hayai_annotation_zen_PlantGARDEN_Kegg.tsv.gz

Amino Acid (pep / aa)

Rs_1.0.peptide.fa.gz

Transcript (cDNA / mRNA)

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